WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.6a.1 Sequence Name  Y18H1A.6a.1
Length (nt)  2324   Chromosome Location  I: 719929-731078
Chromosome . Primary Identifier  I Chromosome Location . Start  719929
Chromosome Location . End  731078 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004028 pif-1 Y18H1A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.6a Y18H1A.6a 2034   I: 720078-720253

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6a.1 719929 731078 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1422   325   I: 719929-720253 Caenorhabditis elegans
Exon1423   135   I: 720298-720432 Caenorhabditis elegans
Exon1424   114   I: 720486-720599 Caenorhabditis elegans
Exon1426   141   I: 720644-720784 Caenorhabditis elegans
Exon1428   112   I: 720828-720939 Caenorhabditis elegans
Exon1430   99   I: 722103-722201 Caenorhabditis elegans
Exon1432   112   I: 722244-722355 Caenorhabditis elegans
Exon1435   197   I: 724570-724766 Caenorhabditis elegans
Exon1438   117   I: 725109-725225 Caenorhabditis elegans
Exon1441   107   I: 725286-725392 Caenorhabditis elegans
Exon1444   370   I: 726501-726870 Caenorhabditis elegans
Exon1447   252   I: 730281-730532 Caenorhabditis elegans
Exon1454   243   I: 730836-731078 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6a.1 719929 731078 1

1 Sequence

Length
2324

1 Sequence Ontology Term

Identifier Name Description
transcript