WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.6c.1 Sequence Name  Y18H1A.6c.1
Length (nt)  1716   Chromosome Location  I: 720493-730937
Chromosome . Primary Identifier  I Chromosome Location . Start  720493
Chromosome Location . End  730937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004028 pif-1 Y18H1A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.6c Y18H1A.6c 1716   I: 720493-720599

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6c.1 720493 730937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1425   107   I: 720493-720599 Caenorhabditis elegans
Exon1427   141   I: 720644-720784 Caenorhabditis elegans
Exon1429   112   I: 720828-720939 Caenorhabditis elegans
Exon1431   99   I: 722103-722201 Caenorhabditis elegans
Exon1433   112   I: 722244-722355 Caenorhabditis elegans
Exon1437   197   I: 724570-724766 Caenorhabditis elegans
Exon1440   117   I: 725109-725225 Caenorhabditis elegans
Exon1443   107   I: 725286-725392 Caenorhabditis elegans
Exon1446   370   I: 726501-726870 Caenorhabditis elegans
Exon1449   252   I: 730281-730532 Caenorhabditis elegans
Exon1452   102   I: 730836-730937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6c.1 720493 730937 1

1 Sequence

Length
1716

1 Sequence Ontology Term

Identifier Name Description
transcript