WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.6b.1 Sequence Name  Y18H1A.6b.1
Length (nt)  1185   Chromosome Location  I: 722316-730937
Chromosome . Primary Identifier  I Chromosome Location . Start  722316
Chromosome Location . End  730937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004028 pif-1 Y18H1A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.6b Y18H1A.6b 1185   I: 722316-722355

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6b.1 722316 730937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1434   40   I: 722316-722355 Caenorhabditis elegans
Exon1436   197   I: 724570-724766 Caenorhabditis elegans
Exon1439   117   I: 725109-725225 Caenorhabditis elegans
Exon1442   107   I: 725286-725392 Caenorhabditis elegans
Exon1445   370   I: 726501-726870 Caenorhabditis elegans
Exon1448   252   I: 730281-730532 Caenorhabditis elegans
Exon1451   102   I: 730836-730937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y18H1A.6b.1 722316 730937 1

1 Sequence

Length
1185

1 Sequence Ontology Term

Identifier Name Description
transcript