WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A4.3a.1 Sequence Name  T06A4.3a.1
Length (nt)  1810   Chromosome Location  I: 763478-770720
Chromosome . Primary Identifier  I Chromosome Location . Start  763478
Chromosome Location . End  770720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020283 T06A4.3 T06A4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A4.3a T06A4.3a 1518   I: 763675-763824

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.3a.1 763478 770720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1502   347   I: 763478-763824 Caenorhabditis elegans
Exon1504   137   I: 765138-765274 Caenorhabditis elegans
Exon1506   214   I: 765432-765645 Caenorhabditis elegans
Exon1508   102   I: 766048-766149 Caenorhabditis elegans
Exon1510   120   I: 766326-766445 Caenorhabditis elegans
Exon1512   115   I: 766527-766641 Caenorhabditis elegans
Exon1514   152   I: 767583-767734 Caenorhabditis elegans
Exon1516   60   I: 768165-768224 Caenorhabditis elegans
Exon1518   175   I: 768274-768448 Caenorhabditis elegans
Exon1520   129   I: 768500-768628 Caenorhabditis elegans
Exon1523   259   I: 770462-770720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.3a.1 763478 770720 1

1 Sequence

Length
1810

1 Sequence Ontology Term

Identifier Name Description
transcript