WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A4.3b.1 Sequence Name  T06A4.3b.1
Length (nt)  1523   Chromosome Location  I: 763649-768941
Chromosome . Primary Identifier  I Chromosome Location . Start  763649
Chromosome Location . End  768941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020283 T06A4.3 T06A4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A4.3b T06A4.3b 1368   I: 763675-763824

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.3b.1 763649 768941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1503   176   I: 763649-763824 Caenorhabditis elegans
Exon1505   137   I: 765138-765274 Caenorhabditis elegans
Exon1507   214   I: 765432-765645 Caenorhabditis elegans
Exon1509   102   I: 766048-766149 Caenorhabditis elegans
Exon1511   120   I: 766326-766445 Caenorhabditis elegans
Exon1513   115   I: 766527-766641 Caenorhabditis elegans
Exon1515   152   I: 767583-767734 Caenorhabditis elegans
Exon1517   60   I: 768165-768224 Caenorhabditis elegans
Exon1519   175   I: 768274-768448 Caenorhabditis elegans
Exon1521   129   I: 768500-768628 Caenorhabditis elegans
Exon1522   143   I: 768799-768941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.3b.1 763649 768941 1

1 Sequence

Length
1523

1 Sequence Ontology Term

Identifier Name Description
transcript