WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A4.1a.1 Sequence Name  T06A4.1a.1
Length (nt)  1937   Chromosome Location  I: 770919-776369
Chromosome . Primary Identifier  I Chromosome Location . Start  770919
Chromosome Location . End  776369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020281 T06A4.1 T06A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A4.1a T06A4.1a 1281   I: 773203-773385

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.1a.1 770919 776369 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1525   140   I: 770919-771058 Caenorhabditis elegans
Exon1526   116   I: 771451-771566 Caenorhabditis elegans
Exon1528   106   I: 771806-771911 Caenorhabditis elegans
Exon1530   187   I: 771968-772154 Caenorhabditis elegans
Exon1533   222   I: 773164-773385 Caenorhabditis elegans
Exon1535   112   I: 773435-773546 Caenorhabditis elegans
Exon1538   288   I: 773700-773987 Caenorhabditis elegans
Exon1543   97   I: 774968-775064 Caenorhabditis elegans
Exon1546   463   I: 775110-775572 Caenorhabditis elegans
Exon1550   206   I: 776164-776369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A4.1a.1 770919 776369 1

1 Sequence

Length
1937

1 Sequence Ontology Term

Identifier Name Description
transcript