WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC123.3a.1 Sequence Name  ZC123.3a.1
Length (nt)  4979   Chromosome Location  I: 803368-834765
Chromosome . Primary Identifier  I Chromosome Location . Start  803368
Chromosome Location . End  834765 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC123.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022518 zfh-2 ZC123.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC123.3a ZC123.3a 4848   I: 803402-803474

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC123.3a.1 803368 834765 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1556   107   I: 803368-803474 Caenorhabditis elegans
Exon1558   78   I: 804345-804422 Caenorhabditis elegans
Exon1559   426   I: 804470-804895 Caenorhabditis elegans
Exon1560   281   I: 805600-805880 Caenorhabditis elegans
Exon1564   223   I: 810861-811083 Caenorhabditis elegans
Exon1566   48   I: 812702-812749 Caenorhabditis elegans
Exon1570   57   I: 819366-819422 Caenorhabditis elegans
Exon1573   181   I: 820264-820444 Caenorhabditis elegans
Exon1576   178   I: 823093-823270 Caenorhabditis elegans
Exon1580   153   I: 824610-824762 Caenorhabditis elegans
Exon1584   213   I: 827630-827842 Caenorhabditis elegans
Exon1589   701   I: 828025-828725 Caenorhabditis elegans
Exon1594   115   I: 829812-829926 Caenorhabditis elegans
Exon1600   614   I: 831109-831722 Caenorhabditis elegans
Exon1606   1044   I: 831777-832820 Caenorhabditis elegans
Exon1612   244   I: 832890-833133 Caenorhabditis elegans
Exon1618   90   I: 833183-833272 Caenorhabditis elegans
Exon1630   226   I: 834540-834765 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC123.3a.1 803368 834765 1

1 Sequence

Length
4979

1 Sequence Ontology Term

Identifier Name Description
transcript