WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC123.3c.1 Sequence Name  ZC123.3c.1
Length (nt)  3708   Chromosome Location  I: 819377-834668
Chromosome . Primary Identifier  I Chromosome Location . Start  819377
Chromosome Location . End  834668 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC123.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022518 zfh-2 ZC123.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC123.3c ZC123.3c 3708   I: 819377-819422

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC123.3c.1 819377 834668 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1572   46   I: 819377-819422 Caenorhabditis elegans
Exon1575   181   I: 820264-820444 Caenorhabditis elegans
Exon1578   178   I: 823093-823270 Caenorhabditis elegans
Exon1582   153   I: 824610-824762 Caenorhabditis elegans
Exon1586   213   I: 827630-827842 Caenorhabditis elegans
Exon1591   701   I: 828025-828725 Caenorhabditis elegans
Exon1596   115   I: 829812-829926 Caenorhabditis elegans
Exon1602   614   I: 831109-831722 Caenorhabditis elegans
Exon1608   1044   I: 831777-832820 Caenorhabditis elegans
Exon1614   244   I: 832890-833133 Caenorhabditis elegans
Exon1620   90   I: 833183-833272 Caenorhabditis elegans
Exon1626   129   I: 834540-834668 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC123.3c.1 819377 834668 1

1 Sequence

Length
3708

1 Sequence Ontology Term

Identifier Name Description
transcript