WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.8.1 Sequence Name  Y95B8A.8.1
Length (nt)  3312   Chromosome Location  I: 853451-872827
Chromosome . Primary Identifier  I Chromosome Location . Start  853451
Chromosome Location . End  872827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022388 zfr-1 Y95B8A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.8 Y95B8A.8 2295   I: 853459-853487

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.8.1 853451 872827 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1663   37   I: 853451-853487 Caenorhabditis elegans
Exon1664   66   I: 853561-853626 Caenorhabditis elegans
Exon1665   73   I: 853697-853769 Caenorhabditis elegans
Exon1666   103   I: 853828-853930 Caenorhabditis elegans
Exon1667   119   I: 853986-854104 Caenorhabditis elegans
Exon1668   347   I: 858489-858835 Caenorhabditis elegans
Exon1669   434   I: 861486-861919 Caenorhabditis elegans
Exon1670   416   I: 864404-864819 Caenorhabditis elegans
Exon1672   204   I: 865731-865934 Caenorhabditis elegans
Exon1673   96   I: 866763-866858 Caenorhabditis elegans
Exon1674   112   I: 868610-868721 Caenorhabditis elegans
Exon1675   131   I: 870194-870324 Caenorhabditis elegans
Exon1676   1174   I: 871654-872827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.8.1 853451 872827 1

1 Sequence

Length
3312

1 Sequence Ontology Term

Identifier Name Description
transcript