WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y95B8A.5a Sequence Name  Y95B8A.5a
Length (nt)  1074   Chromosome Location  I: 897290-897355
Chromosome . Primary Identifier  I Chromosome Location . Start  897290
Chromosome Location . End  897355
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24692 GPA-16, isoform a 41.3 357 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00063507
WBRNAi00058668
WBRNAi00087532
WBRNAi00087533
WBRNAi00085877
WBRNAi00020924
WBRNAi00110351
WBRNAi00085874
WBRNAi00085876
WBRNAi00085875
WBRNAi00063512
WBRNAi00079150
WBRNAi00087531
WBRNAi00062800
WBRNAi00062803
WBRNAi00114509
WBRNAi00114508
WBRNAi00114510

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y95B8A.5a 897290 897355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001678 gpa-16 Y95B8A.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y95B8A.5a 897290 897355 1
CDS:Y95B8A.5a 898179 898349 1
CDS:Y95B8A.5a 900613 900800 1
CDS:Y95B8A.5a 903103 903190 1
CDS:Y95B8A.5a 903253 903329 1
CDS:Y95B8A.5a 903382 903511 1
CDS:Y95B8A.5a 904611 904844 1
CDS:Y95B8A.5a 905734 905853 1

1 Sequence

Length
1074

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y95B8A.5a.1 Y95B8A.5a.1 2595   I: 897286-907370