WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y95B8A.12e.1 Sequence Name  Y95B8A.12e.1
Length (nt)  2030   Chromosome Location  I: 912343-926649
Chromosome . Primary Identifier  I Chromosome Location . Start  912343
Chromosome Location . End  926649 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y95B8A.12e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022391 prhg-1 Y95B8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y95B8A.12e Y95B8A.12e 1845   I: 912441-912573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12e.1 912343 926649 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1780   231   I: 912343-912573 Caenorhabditis elegans
Exon1787   202   I: 912625-912826 Caenorhabditis elegans
Exon1793   109   I: 914002-914110 Caenorhabditis elegans
Exon1799   186   I: 914164-914349 Caenorhabditis elegans
Exon1805   411   I: 914408-914818 Caenorhabditis elegans
Exon1811   100   I: 915980-916079 Caenorhabditis elegans
Exon1818   236   I: 916171-916406 Caenorhabditis elegans
Exon1824   203   I: 917211-917413 Caenorhabditis elegans
Exon1833   217   I: 918779-918995 Caenorhabditis elegans
Exon1838   135   I: 926515-926649 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y95B8A.12e.1 912343 926649 -1

1 Sequence

Length
2030

1 Sequence Ontology Term

Identifier Name Description
transcript