WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G6.2b.1 Sequence Name  C54G6.2b.1
Length (nt)  537   Chromosome Location  I: 1009550-1010765
Chromosome . Primary Identifier  I Chromosome Location . Start  1009550
Chromosome Location . End  1010765 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016931 C54G6.2 C54G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G6.2b C54G6.2b 537   I: 1009550-1009753

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G6.2b.1 1009550 1010765 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1978   204   I: 1009550-1009753 Caenorhabditis elegans
Exon1980   72   I: 1009818-1009889 Caenorhabditis elegans
Exon1982   87   I: 1010205-1010291 Caenorhabditis elegans
Exon1984   174   I: 1010592-1010765 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G6.2b.1 1009550 1010765 1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
transcript