WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G6.5.1 Sequence Name  C54G6.5.1
Length (nt)  365   Chromosome Location  I: 1016405-1017176
Chromosome . Primary Identifier  I Chromosome Location . Start  1016405
Chromosome Location . End  1017176 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005002 spp-17 C54G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G6.5 C54G6.5 315   I: 1016410-1016524

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G6.5.1 1016405 1017176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1999   120   I: 1016405-1016524 Caenorhabditis elegans
Exon2000   245   I: 1016932-1017176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G6.5.1 1016405 1017176 1

1 Sequence

Length
365

1 Sequence Ontology Term

Identifier Name Description
transcript