WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y34D9A.4 Sequence Name  Y34D9A.4
Length (nt)  1590   Chromosome Location  I: 1030829-1031083
Chromosome . Primary Identifier  I Chromosome Location . Start  1030829
Chromosome Location . End  1031083
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34D9A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37061 SPD-1 62.3 529 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00022474
WBRNAi00055831
WBRNAi00026637
WBRNAi00026638
WBRNAi00026639
WBRNAi00026640
WBRNAi00004575
WBRNAi00004576
WBRNAi00087250
WBRNAi00036766
WBRNAi00036768
WBRNAi00071090
WBRNAi00062057
WBRNAi00061693
WBRNAi00062058
WBRNAi00086963
WBRNAi00086965
WBRNAi00086964
WBRNAi00087165
WBRNAi00087249
WBRNAi00086966
WBRNAi00087151
WBRNAi00087251
WBRNAi00086967
WBRNAi00084905
WBRNAi00114368
WBRNAi00113680
WBRNAi00112096
WBRNAi00113681

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y34D9A.4 1030829 1031083 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004952 spd-1 Y34D9A.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y34D9A.4 1030829 1031083 -1
CDS:Y34D9A.4 1031995 1032873 -1
CDS:Y34D9A.4 1032928 1033212 -1
CDS:Y34D9A.4 1033265 1033435 -1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y34D9A.4.1 Y34D9A.4.1 1787   I: 1030633-1033436