WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34D9A.3b.1 Sequence Name  Y34D9A.3b.1
Length (nt)  2133   Chromosome Location  I: 1034787-1040763
Chromosome . Primary Identifier  I Chromosome Location . Start  1034787
Chromosome Location . End  1040763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34D9A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021329 Y34D9A.3 Y34D9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34D9A.3b Y34D9A.3b 2133   I: 1034787-1034879

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34D9A.3b.1 1034787 1040763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2019   93   I: 1034787-1034879 Caenorhabditis elegans
Exon2021   132   I: 1034932-1035063 Caenorhabditis elegans
Exon2025   124   I: 1035121-1035244 Caenorhabditis elegans
Exon2029   93   I: 1035304-1035396 Caenorhabditis elegans
Exon2033   140   I: 1037312-1037451 Caenorhabditis elegans
Exon2037   208   I: 1037506-1037713 Caenorhabditis elegans
Exon2041   120   I: 1039053-1039172 Caenorhabditis elegans
Exon2045   80   I: 1039215-1039294 Caenorhabditis elegans
Exon2049   544   I: 1039338-1039881 Caenorhabditis elegans
Exon2054   533   I: 1040114-1040646 Caenorhabditis elegans
Exon2059   66   I: 1040698-1040763 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34D9A.3b.1 1034787 1040763 1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript