WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06A10.2b.1 Sequence Name  R06A10.2b.1
Length (nt)  858   Chromosome Location  I: 1070383-1074343
Chromosome . Primary Identifier  I Chromosome Location . Start  1070383
Chromosome Location . End  1074343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06A10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001745 gsa-1 R06A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06A10.2b R06A10.2b 858   I: 1070383-1070487

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06A10.2b.1 1070383 1074343 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2101   105   I: 1070383-1070487 Caenorhabditis elegans
Exon2103   98   I: 1071470-1071567 Caenorhabditis elegans
Exon2105   129   I: 1071621-1071749 Caenorhabditis elegans
Exon2107   135   I: 1071799-1071933 Caenorhabditis elegans
Exon2109   244   I: 1072673-1072916 Caenorhabditis elegans
Exon2111   147   I: 1074197-1074343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06A10.2b.1 1070383 1074343 1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
transcript