WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G8AL.11a Sequence Name  Y48G8AL.11a
Length (nt)  2007   Chromosome Location  I: 1162953-1163042
Chromosome . Primary Identifier  I Chromosome Location . Start  1162953
Chromosome Location . End  1163042
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39850 HAF-6, isoform a 73.3 668 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056962
WBRNAi00116497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.11a 1162953 1163042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001816 haf-6 Y48G8AL.11 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.11a 1162953 1163042 -1
CDS:Y48G8AL.11a 1164509 1164726 -1
CDS:Y48G8AL.11a 1166226 1166325 -1
CDS:Y48G8AL.11a 1166378 1166583 -1
CDS:Y48G8AL.11a 1167652 1167976 -1
CDS:Y48G8AL.11a 1169557 1169800 -1
CDS:Y48G8AL.11a 1170670 1170896 -1
CDS:Y48G8AL.11a 1173808 1174095 -1
CDS:Y48G8AL.11a 1175384 1175627 -1
CDS:Y48G8AL.11a 1175689 1175753 -1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G8AL.11a.1 Y48G8AL.11a.1 2136   I: 1162880-1175809