WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.13a.3 Sequence Name  Y48G8AL.13a.3
Length (nt)  1202   Chromosome Location  I: 1223948-1227882
Chromosome . Primary Identifier  I Chromosome Location . Start  1223948
Chromosome Location . End  1227882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.13a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021691 Y48G8AL.13 Y48G8AL.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.13a Y48G8AL.13a 837   I: 1224161-1224334

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.13a.3 1223948 1227882 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2275   387   I: 1223948-1224334 Caenorhabditis elegans
Exon2281   124   I: 1224655-1224778 Caenorhabditis elegans
Exon2287   360   I: 1225176-1225535 Caenorhabditis elegans
Exon2290   193   I: 1226620-1226812 Caenorhabditis elegans
Exon2291   138   I: 1227745-1227882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.13a.3 1223948 1227882 -1

1 Sequence

Length
1202

1 Sequence Ontology Term

Identifier Name Description
transcript