WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48G8AL.1d Sequence Name  Y48G8AL.1d
Length (nt)  1515   Chromosome Location  I: 1236322-1236358
Chromosome . Primary Identifier  I Chromosome Location . Start  1236322
Chromosome Location . End  1236358
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49556 HERC-1, isoform d 58.2 504 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00094650
WBRNAi00020759
WBRNAi00076799
WBRNAi00117107

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.1d 1236322 1236358 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021685 herc-1 Y48G8AL.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48G8AL.1d 1236322 1236358 1
CDS:Y48G8AL.1d 1237954 1238105 1
CDS:Y48G8AL.1d 1239439 1239639 1
CDS:Y48G8AL.1d 1241100 1241255 1
CDS:Y48G8AL.1d 1242769 1242857 1
CDS:Y48G8AL.1d 1245227 1245392 1
CDS:Y48G8AL.1d 1247363 1247590 1
CDS:Y48G8AL.1d 1247779 1247958 1
CDS:Y48G8AL.1d 1253333 1253515 1
CDS:Y48G8AL.1d 1254377 1254499 1

1 Sequence

Length
1515

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48G8AL.1d.1 Y48G8AL.1d.1 1515   I: 1236322-1254499