WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12C11.4a.1 Sequence Name  K12C11.4a.1
Length (nt)  4788   Chromosome Location  I: 1305562-1328648
Chromosome . Primary Identifier  I Chromosome Location . Start  1305562
Chromosome Location . End  1328648 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12C11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003400 dapk-1 K12C11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12C11.4a K12C11.4a 4278   I: 1305575-1305681

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.4a.1 1305562 1328648 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2398   120   I: 1305562-1305681 Caenorhabditis elegans
Exon2399   225   I: 1306929-1307153 Caenorhabditis elegans
Exon2401   339   I: 1307860-1308198 Caenorhabditis elegans
Exon2403   497   I: 1309106-1309602 Caenorhabditis elegans
Exon2405   302   I: 1310989-1311290 Caenorhabditis elegans
Exon2408   99   I: 1312839-1312937 Caenorhabditis elegans
Exon2412   198   I: 1320040-1320237 Caenorhabditis elegans
Exon2416   276   I: 1320348-1320623 Caenorhabditis elegans
Exon2420   550   I: 1321782-1322331 Caenorhabditis elegans
Exon2424   452   I: 1323279-1323730 Caenorhabditis elegans
Exon2428   432   I: 1324579-1325010 Caenorhabditis elegans
Exon2431   537   I: 1326073-1326609 Caenorhabditis elegans
Exon2438   761   I: 1327888-1328648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.4a.1 1305562 1328648 1

1 Sequence

Length
4788

1 Sequence Ontology Term

Identifier Name Description
transcript