WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12C11.1a.1 Sequence Name  K12C11.1a.1
Length (nt)  1580   Chromosome Location  I: 1341272-1344692
Chromosome . Primary Identifier  I Chromosome Location . Start  1341272
Chromosome Location . End  1344692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12C11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019673 K12C11.1 K12C11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12C11.1a K12C11.1a 1497   I: 1341355-1341636

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.1a.1 1341272 1344692 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2467   365   I: 1341272-1341636 Caenorhabditis elegans
Exon2470   555   I: 1342172-1342726 Caenorhabditis elegans
Exon2471   660   I: 1344033-1344692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12C11.1a.1 1341272 1344692 -1

1 Sequence

Length
1580

1 Sequence Ontology Term

Identifier Name Description
transcript