WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47G6.4a Sequence Name  F47G6.4a
Length (nt)  3660   Chromosome Location  I: 1446666-1446947
Chromosome . Primary Identifier  I Chromosome Location . Start  1446666
Chromosome Location . End  1446947
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G6.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17841 SPE-15, isoform a 138.4 1219 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00047691
WBRNAi00072272
WBRNAi00074405
WBRNAi00003707
WBRNAi00032456
WBRNAi00074407
WBRNAi00074406
WBRNAi00074401
WBRNAi00074403
WBRNAi00074402
WBRNAi00074404

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47G6.4a 1446666 1446947 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004969 spe-15 F47G6.4 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47G6.4a 1446666 1446947 1
CDS:F47G6.4a 1447263 1447557 1
CDS:F47G6.4a 1447910 1448007 1
CDS:F47G6.4a 1448085 1448249 1
CDS:F47G6.4a 1449235 1450250 1
CDS:F47G6.4a 1454245 1454380 1
CDS:F47G6.4a 1454430 1454750 1
CDS:F47G6.4a 1454800 1454911 1
CDS:F47G6.4a 1455674 1455764 1
CDS:F47G6.4a 1460229 1460286 1
CDS:F47G6.4a 1460545 1460729 1
CDS:F47G6.4a 1461515 1461628 1
CDS:F47G6.4a 1461673 1461959 1
CDS:F47G6.4a 1463567 1463698 1
CDS:F47G6.4a 1463932 1464051 1
CDS:F47G6.4a 1464367 1464471 1
CDS:F47G6.4a 1465072 1465214 1

1 Sequence

Length
3660

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47G6.4a.1 F47G6.4a.1 3889   I: 1446497-1465358