WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G6.1b.1 Sequence Name  F47G6.1b.1
Length (nt)  1539   Chromosome Location  I: 1484823-1490321
Chromosome . Primary Identifier  I Chromosome Location . Start  1484823
Chromosome Location . End  1490321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001115 dyb-1 F47G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G6.1b F47G6.1b 1539   I: 1484823-1484876

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47G6.1b.1 1484823 1490321 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2604   54   I: 1484823-1484876 Caenorhabditis elegans
Exon2606   137   I: 1484923-1485059 Caenorhabditis elegans
Exon2609   86   I: 1485926-1486011 Caenorhabditis elegans
Exon2611   196   I: 1486056-1486251 Caenorhabditis elegans
Exon2614   232   I: 1487179-1487410 Caenorhabditis elegans
Exon2618   327   I: 1487769-1488095 Caenorhabditis elegans
Exon2621   252   I: 1488424-1488675 Caenorhabditis elegans
Exon2625   214   I: 1489068-1489281 Caenorhabditis elegans
Exon2627   41   I: 1490281-1490321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47G6.1b.1 1484823 1490321 1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
transcript