WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47G6.1c.1 Sequence Name  F47G6.1c.1
Length (nt)  1595   Chromosome Location  I: 1485854-1490496
Chromosome . Primary Identifier  I Chromosome Location . Start  1485854
Chromosome Location . End  1490496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47G6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001115 dyb-1 F47G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47G6.1c F47G6.1c 72   I: 1489251-1489281

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47G6.1c.1 1485854 1490496 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2607   158   I: 1485854-1486011 Caenorhabditis elegans
Exon2612   196   I: 1486056-1486251 Caenorhabditis elegans
Exon2615   232   I: 1487179-1487410 Caenorhabditis elegans
Exon2619   327   I: 1487769-1488095 Caenorhabditis elegans
Exon2622   252   I: 1488424-1488675 Caenorhabditis elegans
Exon2626   214   I: 1489068-1489281 Caenorhabditis elegans
Exon2628   216   I: 1490281-1490496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47G6.1c.1 1485854 1490496 1

1 Sequence

Length
1595

1 Sequence Ontology Term

Identifier Name Description
transcript