WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92H12A.5b.1 Sequence Name  Y92H12A.5b.1
Length (nt)  5048   Chromosome Location  I: 1490431-1514411
Chromosome . Primary Identifier  I Chromosome Location . Start  1490431
Chromosome Location . End  1514411 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92H12A.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022361 Y92H12A.5 Y92H12A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.5b Y92H12A.5b 4137   I: 1491340-1491489

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.5b.1 1490431 1514411 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2631   1059   I: 1490431-1491489 Caenorhabditis elegans
Exon2634   156   I: 1492386-1492541 Caenorhabditis elegans
Exon2636   132   I: 1494680-1494811 Caenorhabditis elegans
Exon2638   118   I: 1495718-1495835 Caenorhabditis elegans
Exon2640   113   I: 1495902-1496014 Caenorhabditis elegans
Exon2642   78   I: 1497064-1497141 Caenorhabditis elegans
Exon2644   717   I: 1498798-1499514 Caenorhabditis elegans
Exon2646   546   I: 1500688-1501233 Caenorhabditis elegans
Exon2648   336   I: 1502689-1503024 Caenorhabditis elegans
Exon2650   332   I: 1504477-1504808 Caenorhabditis elegans
Exon2652   463   I: 1506880-1507342 Caenorhabditis elegans
Exon2654   790   I: 1511224-1512013 Caenorhabditis elegans
Exon2656   208   I: 1514204-1514411 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.5b.1 1490431 1514411 -1

1 Sequence

Length
5048

1 Sequence Ontology Term

Identifier Name Description
transcript