WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92H12A.4a.2 Sequence Name  Y92H12A.4a.2
Length (nt)  4838   Chromosome Location  I: 1514755-1540878
Chromosome . Primary Identifier  I Chromosome Location . Start  1514755
Chromosome Location . End  1540878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92H12A.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022360 ints-3 Y92H12A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.4a Y92H12A.4a 3159   I: 1514762-1514899

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.4a.2 1514755 1540878 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2658   145   I: 1514755-1514899 Caenorhabditis elegans
Exon2662   105   I: 1514954-1515058 Caenorhabditis elegans
Exon2665   76   I: 1515110-1515185 Caenorhabditis elegans
Exon2668   164   I: 1515232-1515395 Caenorhabditis elegans
Exon2672   588   I: 1517533-1518120 Caenorhabditis elegans
Exon2676   113   I: 1520158-1520270 Caenorhabditis elegans
Exon2681   285   I: 1522174-1522458 Caenorhabditis elegans
Exon2687   346   I: 1524298-1524643 Caenorhabditis elegans
Exon2693   161   I: 1525845-1526005 Caenorhabditis elegans
Exon2698   369   I: 1526977-1527345 Caenorhabditis elegans
Exon2703   209   I: 1529890-1530098 Caenorhabditis elegans
Exon2708   161   I: 1532237-1532397 Caenorhabditis elegans
Exon2713   185   I: 1533100-1533284 Caenorhabditis elegans
Exon2718   114   I: 1533938-1534051 Caenorhabditis elegans
Exon2723   70   I: 1534116-1534185 Caenorhabditis elegans
Exon2731   1747   I: 1539132-1540878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.4a.2 1514755 1540878 1

1 Sequence

Length
4838

1 Sequence Ontology Term

Identifier Name Description
transcript