WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92H12A.4d.1 Sequence Name  Y92H12A.4d.1
Length (nt)  2007   Chromosome Location  I: 1520239-1539206
Chromosome . Primary Identifier  I Chromosome Location . Start  1520239
Chromosome Location . End  1539206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92H12A.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022360 ints-3 Y92H12A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.4d Y92H12A.4d 2007   I: 1520239-1520270

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.4d.1 1520239 1539206 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2679   32   I: 1520239-1520270 Caenorhabditis elegans
Exon2683   285   I: 1522174-1522458 Caenorhabditis elegans
Exon2689   346   I: 1524298-1524643 Caenorhabditis elegans
Exon2695   161   I: 1525845-1526005 Caenorhabditis elegans
Exon2700   369   I: 1526977-1527345 Caenorhabditis elegans
Exon2705   209   I: 1529890-1530098 Caenorhabditis elegans
Exon2710   161   I: 1532237-1532397 Caenorhabditis elegans
Exon2715   185   I: 1533100-1533284 Caenorhabditis elegans
Exon2720   114   I: 1533938-1534051 Caenorhabditis elegans
Exon2725   70   I: 1534116-1534185 Caenorhabditis elegans
Exon2728   75   I: 1539132-1539206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.4d.1 1520239 1539206 1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
transcript