WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y92H12A.2a.1 Sequence Name  Y92H12A.2a.1
Length (nt)  2589   Chromosome Location  I: 1543525-1556195
Chromosome . Primary Identifier  I Chromosome Location . Start  1543525
Chromosome Location . End  1556195 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92H12A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022358 Y92H12A.2 Y92H12A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.2a Y92H12A.2a 2175   I: 1543633-1543680

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.2a.1 1543525 1556195 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2734   156   I: 1543525-1543680 Caenorhabditis elegans
Exon2735   150   I: 1543824-1543973 Caenorhabditis elegans
Exon2737   206   I: 1544285-1544490 Caenorhabditis elegans
Exon2738   204   I: 1544761-1544964 Caenorhabditis elegans
Exon2739   133   I: 1545631-1545763 Caenorhabditis elegans
Exon2740   378   I: 1550351-1550728 Caenorhabditis elegans
Exon2742   114   I: 1551999-1552112 Caenorhabditis elegans
Exon2744   146   I: 1552703-1552848 Caenorhabditis elegans
Exon2746   367   I: 1553516-1553882 Caenorhabditis elegans
Exon2748   326   I: 1554797-1555122 Caenorhabditis elegans
Exon2750   409   I: 1555787-1556195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.2a.1 1543525 1556195 1

1 Sequence

Length
2589

1 Sequence Ontology Term

Identifier Name Description
transcript