WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92H12A.1b.1 Sequence Name  Y92H12A.1b.1
Length (nt)  1614   Chromosome Location  I: 1567609-1579280
Chromosome . Primary Identifier  I Chromosome Location . Start  1567609
Chromosome Location . End  1579280 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92H12A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.1b.1 1567609 1579280 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2754   77   I: 1567609-1567685 Caenorhabditis elegans
Exon2755   345   I: 1570337-1570681 Caenorhabditis elegans
Exon2759   152   I: 1571933-1572084 Caenorhabditis elegans
Exon2762   349   I: 1574143-1574491 Caenorhabditis elegans
Exon2767   482   I: 1577387-1577868 Caenorhabditis elegans
Exon2770   209   I: 1579072-1579280 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92H12A.1b.1 1567609 1579280 1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
transcript