WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.16.1 Sequence Name  Y71G12B.16.1
Length (nt)  1431   Chromosome Location  I: 1680446-1685203
Chromosome . Primary Identifier  I Chromosome Location . Start  1680446
Chromosome Location . End  1685203 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022154 drag-1 Y71G12B.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.16 Y71G12B.16 1227   I: 1680510-1680558

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.16.1 1680446 1685203 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2954   113   I: 1680446-1680558 Caenorhabditis elegans
Exon2955   271   I: 1681628-1681898 Caenorhabditis elegans
Exon2956   602   I: 1682830-1683431 Caenorhabditis elegans
Exon2957   69   I: 1684381-1684449 Caenorhabditis elegans
Exon2958   376   I: 1684828-1685203 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.16.1 1680446 1685203 1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript