WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.31a.1 Sequence Name  Y71G12B.31a.1
Length (nt)  1272   Chromosome Location  I: 1686216-1693457
Chromosome . Primary Identifier  I Chromosome Location . Start  1686216
Chromosome Location . End  1693457 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.31a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044348 Y71G12B.31 Y71G12B.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.31a Y71G12B.31a 1272   I: 1686216-1686330

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.31a.1 1686216 1693457 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2959   115   I: 1686216-1686330 Caenorhabditis elegans
Exon2961   87   I: 1686383-1686469 Caenorhabditis elegans
Exon2964   323   I: 1687765-1688087 Caenorhabditis elegans
Exon2965   156   I: 1691050-1691205 Caenorhabditis elegans
Exon2966   59   I: 1691279-1691337 Caenorhabditis elegans
Exon2967   94   I: 1691403-1691496 Caenorhabditis elegans
Exon2969   82   I: 1691561-1691642 Caenorhabditis elegans
Exon2971   237   I: 1693009-1693245 Caenorhabditis elegans
Exon2973   112   I: 1693294-1693405 Caenorhabditis elegans
Exon2974   7   I: 1693451-1693457 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.31a.1 1686216 1693457 -1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript