WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.11c.1 Sequence Name  Y71G12B.11c.1
Length (nt)  5741   Chromosome Location  I: 1729827-1740272
Chromosome . Primary Identifier  I Chromosome Location . Start  1729827
Chromosome Location . End  1740272 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006771 tln-1 Y71G12B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.11c Y71G12B.11c 5673   I: 1729895-1730055

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.11c.1 1729827 1740272 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3014   229   I: 1729827-1730055 Caenorhabditis elegans
Exon3017   757   I: 1730817-1731573 Caenorhabditis elegans
Exon3025   74   I: 1733297-1733370 Caenorhabditis elegans
Exon3029   4081   I: 1734447-1738527 Caenorhabditis elegans
Exon3038   384   I: 1738827-1739210 Caenorhabditis elegans
Exon3041   216   I: 1740057-1740272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.11c.1 1729827 1740272 1

1 Sequence

Length
5741

1 Sequence Ontology Term

Identifier Name Description
transcript