WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71G12B.24a Sequence Name  Y71G12B.24a
Length (nt)  1545   Chromosome Location  I: 1740763-1740917
Chromosome . Primary Identifier  I Chromosome Location . Start  1740763
Chromosome Location . End  1740917
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.24a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48095 MPPA-1, isoform a 57.5 514 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058211
WBRNAi00117122
WBRNAi00102819

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.24a 1740763 1740917 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022159 mppa-1 Y71G12B.24 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.24a 1740763 1740917 -1
CDS:Y71G12B.24a 1742490 1742840 -1
CDS:Y71G12B.24a 1745737 1746045 -1
CDS:Y71G12B.24a 1748287 1748695 -1
CDS:Y71G12B.24a 1750735 1751055 -1

1 Sequence

Length
1545

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71G12B.24a.1 Y71G12B.24a.1 1667   I: 1740641-1751055