WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71G12B.8 Sequence Name  Y71G12B.8
Length (nt)  2220   Chromosome Location  I: 1767942-1768499
Chromosome . Primary Identifier  I Chromosome Location . Start  1767942
Chromosome Location . End  1768499
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44034 DDX-27 82.5 739 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00058224
WBRNAi00004822
WBRNAi00004829
WBRNAi00079139
WBRNAi00075472

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.8 1767942 1768499 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022148 ddx-27 Y71G12B.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71G12B.8 1767942 1768499 1
CDS:Y71G12B.8 1769865 1770069 1
CDS:Y71G12B.8 1783692 1783816 1
CDS:Y71G12B.8 1784891 1785383 1
CDS:Y71G12B.8 1787036 1787425 1
CDS:Y71G12B.8 1789557 1790005 1

1 Sequence

Length
2220

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71G12B.8.1 Y71G12B.8.1 2427   I: 1767887-1790157