WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.5a.1 Sequence Name  Y71G12B.5a.1
Length (nt)  3783   Chromosome Location  I: 1799717-1806996
Chromosome . Primary Identifier  I Chromosome Location . Start  1799717
Chromosome Location . End  1806996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022145 Y71G12B.5 Y71G12B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.5a Y71G12B.5a 2850   I: 1799717-1799915

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.5a.1 1799717 1806996 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3101   199   I: 1799717-1799915 Caenorhabditis elegans
Exon3103   357   I: 1800871-1801227 Caenorhabditis elegans
Exon3105   357   I: 1801292-1801648 Caenorhabditis elegans
Exon3107   357   I: 1801702-1802058 Caenorhabditis elegans
Exon3109   363   I: 1802518-1802880 Caenorhabditis elegans
Exon3111   423   I: 1803475-1803897 Caenorhabditis elegans
Exon3113   369   I: 1803944-1804312 Caenorhabditis elegans
Exon3115   365   I: 1804361-1804725 Caenorhabditis elegans
Exon3117   363   I: 1805411-1805773 Caenorhabditis elegans
Exon3119   369   I: 1806322-1806690 Caenorhabditis elegans
Exon3122   261   I: 1806736-1806996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.5a.1 1799717 1806996 1

1 Sequence

Length
3783

1 Sequence Ontology Term

Identifier Name Description
transcript