WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12B.30a.1 Sequence Name  Y71G12B.30a.1
Length (nt)  1105   Chromosome Location  I: 1818504-1822948
Chromosome . Primary Identifier  I Chromosome Location . Start  1818504
Chromosome Location . End  1822948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12B.30a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044347 Y71G12B.30 Y71G12B.30 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.30a Y71G12B.30a 1002   I: 1818590-1818688

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.30a.1 1818504 1822948 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3139   185   I: 1818504-1818688 Caenorhabditis elegans
Exon3142   316   I: 1819013-1819328 Caenorhabditis elegans
Exon3146   294   I: 1820491-1820784 Caenorhabditis elegans
Exon3149   113   I: 1822144-1822256 Caenorhabditis elegans
Exon3151   197   I: 1822752-1822948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12B.30a.1 1818504 1822948 -1

1 Sequence

Length
1105

1 Sequence Ontology Term

Identifier Name Description
transcript