WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01D7.7a.1 Sequence Name  M01D7.7a.1
Length (nt)  2420   Chromosome Location  I: 1835661-1841965
Chromosome . Primary Identifier  I Chromosome Location . Start  1835661
Chromosome Location . End  1841965 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01D7.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001196 egl-30 M01D7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01D7.7a M01D7.7a 1068   I: 1835936-1836053

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.7a.1 1835661 1841965 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3201   393   I: 1835661-1836053 Caenorhabditis elegans
Exon3204   128   I: 1838159-1838286 Caenorhabditis elegans
Exon3205   218   I: 1838780-1838997 Caenorhabditis elegans
Exon3207   129   I: 1839064-1839192 Caenorhabditis elegans
Exon3209   130   I: 1839251-1839380 Caenorhabditis elegans
Exon3211   154   I: 1840095-1840248 Caenorhabditis elegans
Exon3214   108   I: 1840319-1840426 Caenorhabditis elegans
Exon3220   1160   I: 1840806-1841965 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.7a.1 1835661 1841965 1

1 Sequence

Length
2420

1 Sequence Ontology Term

Identifier Name Description
transcript