WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01D7.7b.1 Sequence Name  M01D7.7b.1
Length (nt)  3507   Chromosome Location  I: 1836651-1841937
Chromosome . Primary Identifier  I Chromosome Location . Start  1836651
Chromosome Location . End  1841937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01D7.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001196 egl-30 M01D7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01D7.7b M01D7.7b 912   I: 1838197-1838286

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.7b.1 1836651 1841937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3203   1636   I: 1836651-1838286 Caenorhabditis elegans
Exon3206   218   I: 1838780-1838997 Caenorhabditis elegans
Exon3208   129   I: 1839064-1839192 Caenorhabditis elegans
Exon3210   130   I: 1839251-1839380 Caenorhabditis elegans
Exon3212   154   I: 1840095-1840248 Caenorhabditis elegans
Exon3215   108   I: 1840319-1840426 Caenorhabditis elegans
Exon3219   1132   I: 1840806-1841937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.7b.1 1836651 1841937 1

1 Sequence

Length
3507

1 Sequence Ontology Term

Identifier Name Description
transcript