WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01D7.5.1 Sequence Name  M01D7.5.1
Length (nt)  440   Chromosome Location  I: 1843384-1843959
Chromosome . Primary Identifier  I Chromosome Location . Start  1843384
Chromosome Location . End  1843959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01D7.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003750 nlp-12 M01D7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01D7.5 M01D7.5 243   I: 1843407-1843461

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.5.1 1843384 1843959 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3229   78   I: 1843384-1843461 Caenorhabditis elegans
Exon3230   59   I: 1843541-1843599 Caenorhabditis elegans
Exon3231   303   I: 1843657-1843959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01D7.5.1 1843384 1843959 1

1 Sequence

Length
440

1 Sequence Ontology Term

Identifier Name Description
transcript