WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G12A.3b.1 Sequence Name  Y71G12A.3b.1
Length (nt)  990   Chromosome Location  I: 1879664-1883472
Chromosome . Primary Identifier  I Chromosome Location . Start  1879664
Chromosome Location . End  1883472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G12A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022139 tub-2 Y71G12A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12A.3b Y71G12A.3b 990   I: 1879664-1880209

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12A.3b.1 1879664 1883472 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3264   546   I: 1879664-1880209 Caenorhabditis elegans
Exon3266   306   I: 1881929-1882234 Caenorhabditis elegans
Exon3267   138   I: 1883335-1883472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G12A.3b.1 1879664 1883472 1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
transcript