WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51F10.10a.1 Sequence Name  Y51F10.10a.1
Length (nt)  1267   Chromosome Location  I: 1950594-1958527
Chromosome . Primary Identifier  I Chromosome Location . Start  1950594
Chromosome Location . End  1958527 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51F10.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021771 spe-48 Y51F10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51F10.10a Y51F10.10a 1014   I: 1950773-1950907

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51F10.10a.1 1950594 1958527 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3367   314   I: 1950594-1950907 Caenorhabditis elegans
Exon3372   105   I: 1951130-1951234 Caenorhabditis elegans
Exon3378   276   I: 1953349-1953624 Caenorhabditis elegans
Exon3380   177   I: 1955270-1955446 Caenorhabditis elegans
Exon3384   189   I: 1956865-1957053 Caenorhabditis elegans
Exon3390   107   I: 1958059-1958165 Caenorhabditis elegans
Exon3392   99   I: 1958429-1958527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51F10.10a.1 1950594 1958527 -1

1 Sequence

Length
1267

1 Sequence Ontology Term

Identifier Name Description
transcript