WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y20F4.3b Sequence Name  Y20F4.3b
Length (nt)  1794   Chromosome Location  I: 1988723-1988896
Chromosome . Primary Identifier  I Chromosome Location . Start  1988723
Chromosome Location . End  1988896
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y20F4.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39854 GAP-3, isoform b 66.1 597 Caenorhabditis elegans
 

Other

0 RNAi

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y20F4.3b 1988723 1988896 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021238 gap-3 Y20F4.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y20F4.3b 1988723 1988896 -1
CDS:Y20F4.3b 1990030 1990555 -1
CDS:Y20F4.3b 1991668 1991793 -1
CDS:Y20F4.3b 1993294 1993521 -1
CDS:Y20F4.3b 1995985 1996245 -1
CDS:Y20F4.3b 1997744 1997925 -1
CDS:Y20F4.3b 1999953 2000041 -1
CDS:Y20F4.3b 2000125 2000215 -1
CDS:Y20F4.3b 2001065 2001181 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y20F4.3b.1 Y20F4.3b.1 1794   I: 1988723-2001181