WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E3.8a.1 Sequence Name  Y37E3.8a.1
Length (nt)  481   Chromosome Location  I: 2069681-2070607
Chromosome . Primary Identifier  I Chromosome Location . Start  2069681
Chromosome Location . End  2070607 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021350 rpl-27A Y37E3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E3.8a Y37E3.8a 438   I: 2069721-2069837

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.8a.1 2069681 2070607 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3534   157   I: 2069681-2069837 Caenorhabditis elegans
Exon3538   156   I: 2070052-2070207 Caenorhabditis elegans
Exon3541   168   I: 2070440-2070607 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.8a.1 2069681 2070607 -1

1 Sequence

Length
481

1 Sequence Ontology Term

Identifier Name Description
transcript