WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E3.11a.1 Sequence Name  Y37E3.11a.1
Length (nt)  1314   Chromosome Location  I: 2078957-2085680
Chromosome . Primary Identifier  I Chromosome Location . Start  2078957
Chromosome Location . End  2085680 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E3.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021352 pcyt-2.1 Y37E3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E3.11a Y37E3.11a 1113   I: 2078968-2079026

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.11a.1 2078957 2085680 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3558   70   I: 2078957-2079026 Caenorhabditis elegans
Exon3560   94   I: 2079264-2079357 Caenorhabditis elegans
Exon3563   157   I: 2080744-2080900 Caenorhabditis elegans
Exon3568   197   I: 2081113-2081309 Caenorhabditis elegans
Exon3578   216   I: 2082814-2083029 Caenorhabditis elegans
Exon3584   78   I: 2084339-2084416 Caenorhabditis elegans
Exon3591   72   I: 2084479-2084550 Caenorhabditis elegans
Exon3607   430   I: 2085251-2085680 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.11a.1 2078957 2085680 1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
transcript