WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E3.11i.1 Sequence Name  Y37E3.11i.1
Length (nt)  1375   Chromosome Location  I: 2078959-2085680
Chromosome . Primary Identifier  I Chromosome Location . Start  2078959
Chromosome Location . End  2085680 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E3.11i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021352 pcyt-2.1 Y37E3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E3.11i Y37E3.11i 1176   I: 2078968-2079026

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.11i.1 2078959 2085680 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3559   68   I: 2078959-2079026 Caenorhabditis elegans
Exon3562   94   I: 2079264-2079357 Caenorhabditis elegans
Exon3565   157   I: 2080744-2080900 Caenorhabditis elegans
Exon3572   197   I: 2081113-2081309 Caenorhabditis elegans
Exon3575   21   I: 2081956-2081976 Caenorhabditis elegans
Exon3577   42   I: 2082034-2082075 Caenorhabditis elegans
Exon3582   216   I: 2082814-2083029 Caenorhabditis elegans
Exon3589   78   I: 2084339-2084416 Caenorhabditis elegans
Exon3597   72   I: 2084479-2084550 Caenorhabditis elegans
Exon3608   430   I: 2085251-2085680 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.11i.1 2078959 2085680 1

1 Sequence

Length
1375

1 Sequence Ontology Term

Identifier Name Description
transcript