WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37E3.16.1 Sequence Name  Y37E3.16.1
Length (nt)  1670   Chromosome Location  I: 2113656-2118530
Chromosome . Primary Identifier  I Chromosome Location . Start  2113656
Chromosome Location . End  2118530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E3.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021354 fpn-1.1 Y37E3.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37E3.16 Y37E3.16 1530   I: 2113784-2113930

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.16.1 2113656 2118530 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3655   275   I: 2113656-2113930 Caenorhabditis elegans
Exon3656   357   I: 2115253-2115609 Caenorhabditis elegans
Exon3657   252   I: 2116152-2116403 Caenorhabditis elegans
Exon3658   131   I: 2116450-2116580 Caenorhabditis elegans
Exon3659   119   I: 2116741-2116859 Caenorhabditis elegans
Exon3660   88   I: 2116981-2117068 Caenorhabditis elegans
Exon3661   222   I: 2117121-2117342 Caenorhabditis elegans
Exon3662   154   I: 2117935-2118088 Caenorhabditis elegans
Exon3663   72   I: 2118459-2118530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37E3.16.1 2113656 2118530 -1

1 Sequence

Length
1670

1 Sequence Ontology Term

Identifier Name Description
transcript