WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03F11.6e.1 Sequence Name  W03F11.6e.1
Length (nt)  4078   Chromosome Location  I: 2192420-2209644
Chromosome . Primary Identifier  I Chromosome Location . Start  2192420
Chromosome Location . End  2209644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F11.6e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021009 afd-1 W03F11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F11.6e W03F11.6e 3759   I: 2192428-2192747

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03F11.6e.1 2192420 2209644 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3804   328   I: 2192420-2192747 Caenorhabditis elegans
Exon3808   62   I: 2192844-2192905 Caenorhabditis elegans
Exon3822   1268   I: 2195399-2196666 Caenorhabditis elegans
Exon3836   96   I: 2197189-2197284 Caenorhabditis elegans
Exon3852   140   I: 2200010-2200149 Caenorhabditis elegans
Exon3867   439   I: 2201730-2202168 Caenorhabditis elegans
Exon3882   291   I: 2203574-2203864 Caenorhabditis elegans
Exon3896   384   I: 2204925-2205308 Caenorhabditis elegans
Exon3912   519   I: 2207320-2207838 Caenorhabditis elegans
Exon3937   551   I: 2209094-2209644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03F11.6e.1 2192420 2209644 1

1 Sequence

Length
4078

1 Sequence Ontology Term

Identifier Name Description
transcript