WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03F11.2a.1 Sequence Name  W03F11.2a.1
Length (nt)  3267   Chromosome Location  I: 2223353-2233099
Chromosome . Primary Identifier  I Chromosome Location . Start  2223353
Chromosome Location . End  2233099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03F11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001542 gcy-17 W03F11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03F11.2a W03F11.2a 3267   I: 2223353-2223570

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03F11.2a.1 2223353 2233099 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon3949   218   I: 2223353-2223570 Caenorhabditis elegans
Exon3951   99   I: 2223629-2223727 Caenorhabditis elegans
Exon3953   175   I: 2224301-2224475 Caenorhabditis elegans
Exon3955   193   I: 2224696-2224888 Caenorhabditis elegans
Exon3957   794   I: 2225617-2226410 Caenorhabditis elegans
Exon3959   75   I: 2226869-2226943 Caenorhabditis elegans
Exon3961   120   I: 2226991-2227110 Caenorhabditis elegans
Exon3963   79   I: 2228275-2228353 Caenorhabditis elegans
Exon3965   470   I: 2228399-2228868 Caenorhabditis elegans
Exon3967   123   I: 2230120-2230242 Caenorhabditis elegans
Exon3969   119   I: 2230293-2230411 Caenorhabditis elegans
Exon3971   126   I: 2230466-2230591 Caenorhabditis elegans
Exon3973   112   I: 2231026-2231137 Caenorhabditis elegans
Exon3975   248   I: 2231184-2231431 Caenorhabditis elegans
Exon3977   110   I: 2231485-2231594 Caenorhabditis elegans
Exon3979   167   I: 2232847-2233013 Caenorhabditis elegans
Exon3981   39   I: 2233061-2233099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03F11.2a.1 2223353 2233099 -1

1 Sequence

Length
3267

1 Sequence Ontology Term

Identifier Name Description
transcript