WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12B6.2a.1 Sequence Name  F12B6.2a.1
Length (nt)  1779   Chromosome Location  I: 2250131-2254908
Chromosome . Primary Identifier  I Chromosome Location . Start  2250131
Chromosome Location . End  2254908 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12B6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017398 slc-17.6 F12B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12B6.2a F12B6.2a 1641   I: 2250160-2250211

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.2a.1 2250131 2254908 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4024   81   I: 2250131-2250211 Caenorhabditis elegans
Exon4028   118   I: 2250271-2250388 Caenorhabditis elegans
Exon4032   126   I: 2250711-2250836 Caenorhabditis elegans
Exon4035   137   I: 2251467-2251603 Caenorhabditis elegans
Exon4039   344   I: 2252339-2252682 Caenorhabditis elegans
Exon4043   126   I: 2252882-2253007 Caenorhabditis elegans
Exon4047   130   I: 2253060-2253189 Caenorhabditis elegans
Exon4051   152   I: 2253697-2253848 Caenorhabditis elegans
Exon4056   90   I: 2253950-2254039 Caenorhabditis elegans
Exon4059   88   I: 2254087-2254174 Caenorhabditis elegans
Exon4063   173   I: 2254410-2254582 Caenorhabditis elegans
Exon4070   214   I: 2254695-2254908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.2a.1 2250131 2254908 1

1 Sequence

Length
1779

1 Sequence Ontology Term

Identifier Name Description
transcript