WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12B6.2c.1 Sequence Name  F12B6.2c.1
Length (nt)  1515   Chromosome Location  I: 2250160-2254799
Chromosome . Primary Identifier  I Chromosome Location . Start  2250160
Chromosome Location . End  2254799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12B6.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017398 slc-17.6 F12B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12B6.2c F12B6.2c 1515   I: 2250160-2250211

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.2c.1 2250160 2254799 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4025   52   I: 2250160-2250211 Caenorhabditis elegans
Exon4029   118   I: 2250271-2250388 Caenorhabditis elegans
Exon4036   137   I: 2251467-2251603 Caenorhabditis elegans
Exon4040   344   I: 2252339-2252682 Caenorhabditis elegans
Exon4044   126   I: 2252882-2253007 Caenorhabditis elegans
Exon4048   130   I: 2253060-2253189 Caenorhabditis elegans
Exon4052   152   I: 2253697-2253848 Caenorhabditis elegans
Exon4057   90   I: 2253950-2254039 Caenorhabditis elegans
Exon4060   88   I: 2254087-2254174 Caenorhabditis elegans
Exon4064   173   I: 2254410-2254582 Caenorhabditis elegans
Exon4067   105   I: 2254695-2254799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.2c.1 2250160 2254799 1

1 Sequence

Length
1515

1 Sequence Ontology Term

Identifier Name Description
transcript